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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847861.1_cds_XP_016510197.1_23060
CDS Infomation

[gene=LOC107827560] [db_xref=GeneID:107827560] [protein=E3 ubiquitin-protein ligase SINAT3-like] [protein_id=XP_016510197.1] [location=join(22947..23162,25803..26189,28323..28685)] [gbkey=CDS]
Sequence

ATGGAAGAAATGGAGATGGATAGCATTGAGTGTGTATCATCATCAATGGATGGCATTGAA
GATGAAGAGATCCAATCTTCTGTTTCATCTCATCAACAATACTCTTCAGCAAAACCTCAT
CCTAATGTTGTACCTTCCGGGATTGCCCCTACTAGTGTTCATGAATTGCTCGAATGCCCC
GTTTGTACTAATTCTATGTACCCACCTATTCATCAGTGTCACAATGGACACACGCTCTGT
TCAACTTGCAAAACAAGGGTGCACAATCGATGTCCCACATGCAGACAAGAGCTTGGTGAT
ATAAGGTGTTTAGCGCTAGAGAAGGTAGCAGAGTCGCTTGAACTGCCTTGCAAATATTAT
TCTTTGGGCTGCCCAGAAATATTCCCATATTACAGCAAACTCAAACATGCGACATTGTGC
AATTTTAGACCGTACAATTGCCCATATGCTGGGTCAGAGTGCTCAGTGACCGAAGACATC
CCTTATTTGGTTACACATTTAAGAGATGACCACAAAGTGGATATGCACACAGGATGCACA
TTCAACCATCGTTATGTAAAGTCTAATCCTCGTGAAGTGGAAAATGCCACGTGGATGCTG
ACGGTCTTCCACTGTTTCGGGCAGTATTTCTGTCTCCATTTCGAGGCGTTCCAGCTTGGC
ATGGCACCTGTATATATGGCATTTCTACGCTTCATGGGTGATGAAAGTGAGGCACGCAGT
TACAGCTACAGTCTAGAGGTAGGAGGAAATGGTAGAAAGCTCTTATGGGAGGGTACCCCA
AGAAGTATTCGAGATAGCCACCGCAAGGTGAGAGACAGTCACGATGGTCTTATAATCCAA
CGTAACATGGCACTTTTCTTTTCCGGTGGTGACCGGAAAGAGCTGAAACTTAGAGTTACT
GGACGGATATGGAAGGAACAACAAAATCCAGATGGTGGGGTGTGCATACCAAATCTCTGT
AGCTAA

Peptide Sequence

PEP ID

XP_016510197.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana tabacum]
Sequence

MEEMEMDSIECVSSSMDGIEDEEIQSSVSSHQQYSSAKPHPNVVPSGIAPTSVHELLECP
VCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY
SLGCPEIFPYYSKLKHATLCNFRPYNCPYAGSECSVTEDIPYLVTHLRDDHKVDMHTGCT
FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEARS
YSYSLEVGGNGRKLLWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GRIWKEQQNPDGGVCIPNLCS

Transcript Sequence

Gene sequence data has not been registered.